Basic Information
CFH
Full name: complement factor H
Gene type: protein coding
HGNC ID: HGNC:4883
Gene location: 1q31.3
Gene resources
NCBI: https://www.ncbi.nlm.nih.gov/gene/3075
Alliance of genome: https://www.alliancegenome.org/gene/HGNC:4883
MANE select: https://www.ncbi.nlm.nih.gov/gene/?term=NM_000186.4
Protein resources
UniProt/Swiss-Prot: https://www.uniprot.org/uniprot/P08603
AlphaFold: https://alphafold.ebi.ac.uk/entry/P08603
MEME motif:
Clinical resources
Pathway resources
KEGG pathway: https://www.genome.jp/pathway/hsa04610+3075
Variant resources
Gene | Disease type | Variant type | NCBI dbSNP | Alleles | Variant location |
---|---|---|---|---|---|
CFH | AMD | rs1061170 | |||
CFH | Missense Variant | rs800292 | G>A | chr1:196673103 (GRCh38.p13) | |
CFH | Intron Variant | rs1410996 | G>A / G>C | chr1:196727803 (GRCh38.p13) | |
CFH | early AMD | Intron Variant | rs1329424 | T>A / T>C / T>G | chr1:196677046 (GRCh38.p13) |
CFH | Exudative AMD | Intron Variant | rs3766404 | T>A / T>C | chr1:196682702 (GRCh38.p13) |
CFH | Advanced AMD | Intron Variant | rs1329421 | A>C / A>G / A>T | chr1:196687075 (GRCh38.p13) |
CFH | Advanced AMD | Intron Variant | rs1831282 | A>C / A>G / A>T | chr1:196704863 (GRCh38.p13) |
CFH | Advanced AMD | Intron Variant | rs12144939 | G>A / G>T | chr1:196729815 (GRCh38.p13) |
CFH | Advanced AMD | Intron Variant | rs2284664 | C>A / C>T | chr1:196733395 (GRCh38.p13) |
CFH | Advanced AMD | Intron Variant | rs1329428 | C>G / C>T | chr1:196733680 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10737680 | A>C / A>T | chr1:196710325 (GRCh38.p13) |
CFH | Drusen Area in Central Circle | Intron Variant | rs12038333 | G>A / G>T | chr1:196703324 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs551397 | C>T | chr1:196672942 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10801555 | A>G / A>T | chr1:196691131 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs12124794 | A>G / A>T | chr1:196692408 (GRCh38.p13) |
CFH | AMD | Synonymous Variant | rs2274700 | G>A / G>C / G>T | chr1:196713817 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs380390 | G>A / G>C / G>T | chr1:196731921 (GRCh38.p13) |
CFH | Advanced AMD | rs1410996/rs1329428 | |||
CFH | AMD | Intron Variant | rs570618 | T>C / T>G | chr1:196687934 (GRCh38.p13) |
CFH | 2KB Upstream Variant | rs3753394 | C>T | chr1:196651787 (GRCh38.p13) | |
CFH | Mean Δ CMT ± SD | rs1048663, rs3766405, rs412852, rs11582939, rs1066420, | |||
CFH | Advanced AMD | Missense Variant | rs121913059 | C>T | chr1:196747245 (GRCh38.p13) |
CFH | AMD-FARMS sample | Missense Variant | rs1065489 | G>T | chr1:196740644 (GRCh38.p13) |
CFH | Intron Variant | rs6677604 | G>A | chr1:196717788 (GRCh38.p13) | |
CFH | Missense Variant | rs3753396 | A>C / A>G | chr1:196726612 (GRCh38.p13) | |
CFH | Synonymous Variant | rs1061147 | A>C / A>G / A>T | chr1:196685194 (GRCh38.p13) | |
CFH | rs1831281 | ||||
CFH | Intron Variant | rs419137 | G>A / G>T | chr1:196727745 (GRCh38.p13) | |
CFH | GA | rs800292/rs1061170 | |||
CFH | Mean VA Change at 12 Months | Intron Variant | rs393955 | C>A / C>G | chr1:196723340 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs16840422 | C>A / C>T | chr1:196683704 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs35292876 | C>T | chr1:196737512 (GRCh38.p13) |
CFH | progression with Placebo | Intron Variant | rs3766405 | C>A / C>T | chr1:196726031 (GRCh38.p13) |
CFH | progression with Placebo | Intron Variant | rs412852 | G>A / G>C / G>T | chr1:196734577 (GRCh38.p13) |
CFH | Intron Variant | rs403846 | T>A / T>C / T>G | chr1:196727607 (GRCh38.p13) | |
CFH | N/A | rs88292 | N/A | N/A | |
CFH | AMD | Intron Variant | rs529825 | G>A / G>C | chr1:196665976 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs203674 | G>T | chr1:196715495 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10922109 | C>A / C>T | chr1:196735502 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10922105 | A>C / A>T | chr1:196721120 (GRCh38.p13) |
CFH | wAMD-allele | Intron Variant | rs1329423 | T>A / T>C | chr1:196677257 (GRCh38.p13) |
CFH | wAMD-allele | Intron Variant | rs742855 | T>C | chr1:196736390 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10922104 | A>C / A>G / A>T | chr1:196718600 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs203687 | C>T | chr1:196705140 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs375046 | C>A / C>G | chr1:196736796 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs482934 | G>A / G>C / G>T | chr1:196689367 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs35507625 | delTT / delT / dupT / dupTT / dupTTT / dup(T)4 / ins(T)10 / ins(T)24delTT / delT / dupT / dupTT / dupTTT / dup(T)4 / ins(T)10 / ins(T)24 | chr1:196673840-196673848 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10922103 | G>A | chr1:196701988 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10922102 | C>T | chr1:196699157 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs3753395 | A>G / A>T | chr1:196717522 (GRCh38.p13) |
CFH | exudative AMD | Intron Variant | rs6664877 | C>A / C>T | chr1:196715444 (GRCh38.p13) |
CFH | exudative AMD | Intron Variant | rs6677460 | A>G | chr1:196715445 (GRCh38.p13) |
CFH | exudative AMD | Intron Variant | rs16840522 | T>C | chr1:196741786 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10733086 | A>C / A>T | chr1:196707805 (GRCh38.p13) |
CFH | nAMD | Intron Variant | rs7540032 | C>T | chr1:196732154 (GRCh38.p13) |
CFH | Intron Variant | rs512900 | T>C | chr1:196653234 (GRCh38.p13) | |
CFH | Intron Variant | rs7524776 | T>C | chr1:196654207 (GRCh38.p13) | |
CFH | Intron Variant | rs2019727 | T>A / T>G | chr1:196705584 (GRCh38.p13) | |
CFH | Intron Variant | rs2019724 | T>C | chr1:196705787 (GRCh38.p13) | |
CFH | Intron Variant | rs203685 | C>A / C>G / C>T | chr1:196708815 (GRCh38.p13) | |
CFH | Intron Variant | rs10801560 | C>A | chr1:196745470 (GRCh38.p13) | |
CFH | Missense Variant | rs460897 | C>T | chr1:196747189 (GRCh38.p13) | |
CFH | Intron Variant | rs432007 | A>C / A>T | chr1:196823334 (GRCh38.p13) | |
CFH | AMD | Intron Variant | rs7535263 | G>A / G>C / G>T | chr1:196713216 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10801559 | G>A | chr1:196735074 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10754199 | A>C / A>G / A>T | chr1:196701709 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs1887973 | G>A / G>C / G>T | chr1:196706049 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs4658046 | C>A / C>G / C>T | chr1:196701627 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs10465586 | A>T | chr1:196718199 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs402056 | G>A / G>C | chr1:196702856 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs7529589 | T>A / T>C | chr1:196689149 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs7514261 | G>A / G>T | chr1:196731784 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs514943 | C>A / C>G / C>T | chr1:196694783 (GRCh38.p13) |
CFH | AMD | Intron Variant | rs11582939 | C>T | chr1:196741027 (GRCh38.p13) |
CFH | CNV with treatmenr | rs10234070 |